BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009H08LP1|AL426116
(449 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1035 778 0.0
>3x_Contig1035
Length = 4175
Score = 778 bits (384), Expect = 0.0
Identities = 422/445 (94%)
Strand = Plus / Minus
Query: 1 gcaaatctgcagcagttgtactgtagttaagcatcttgaaaagaamcaacactgcaaaaa 60
|||||||||||||||| |||||||||||||||||||||||||||| || ||||||||| |
Sbjct: 2840 gcaaatctgcagcagtcgtactgtagttaagcatcttgaaaagaaccaccactgcaaaca 2781
Query: 61 ccaacggaattgcaatggtggctatacttctccagttatttctcttgcccttggccatct 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2780 ccaacggaattgcaatggtggctatccttctccagttatttctcttgcccttggccatct 2721
Query: 121 tcacacggatagcgcaagtkatgaaccactaatcaacaccagggstcccgctcgtagtga 180
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 2720 tcacacggatagcgcaagttatgaaccactaatcaacaccagggctcccgctcgtagtga 2661
Query: 181 tataccgttgagagtgtagctgatggaggaataagtatgtattgtttatcattgataata 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 tataccgttgagagtctagctgatggaggaataagtatgtattgtttatcattgataata 2601
Query: 241 ccatttccatagttgaaacactcattcttaaagaaattmattacccggatatataawtta 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 2600 ccatttccatagttgaaacactcattcttaaagaaattcattacccggatatataattta 2541
Query: 301 mtawacttttacwawacctggtttcgatmatgcaaawaacgatggatcctccactttgaa 360
|| |||||||| | ||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 2540 ctatacttttactatacctggtttcgatcatgcaaataacgatggatcctccactttgaa 2481
Query: 361 gcwcgarawmatgtaccgaagcaacgaataggacgcgtgcaccctttgaggtagcntttc 420
|| ||| | |||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2480 gctcgagatcatgtcccgaagcaacgaataggacgcgtgcaccctttgaggtagcttttc 2421
Query: 421 cggtgagtattgcgcaattgcctgt 445
|||||||| ||||||||||||||||
Sbjct: 2420 cggtgagttttgcgcaattgcctgt 2396
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.715 1.33
Gapped
Lambda K H
1.41 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2195
Number of Sequences: 1807
Number of extensions: 2195
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 449
length of database: 10,358,551
effective HSP length: 15
effective length of query: 434
effective length of database: 10,331,446
effective search space: 4483847564
effective search space used: 4483847564
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.8 bits)